MetaCyc Pathway: guanosine nucleotides degradation I in Escherichia coli BW25113
| 5'-nucleotidase: GMP + H2O→guanosine + phosphate (EC 3.1.3.5) |
| b0480 (ushA) |
| b2291 (yfbR) |
| b2744 (surE) |
| b3399 (yrfG) |
| b4055 (aphA) |
| b4374 (yjjG) |
| Guanosine deaminase: guanosine + H+ + H2O→xanthosine + ammonium (EC 3.5.4.15) |
| No genes |
| Purine nucleosidase: xanthosine + H2O→xanthine + D-ribofuranose (EC 3.2.2.1) |
| b0030 (rihC) |
| b0651 (rihA) |
| b2162 (rihB) |
| Xanthine dehydrogenase: xanthine + NAD+ + H2O→urate + NADH + H+ (EC 1.17.1.4) |
| b0284 (yagR) |
| b0285 (yagS) |
| b2866 (xdhA) |
| b2867 (xdhB) |
| b2868 (xdhC) |
Links:
- Pathway details at MetaCyc
- Fitness data for 14 genes
- All MetaCyc pathways for Escherichia coli BW25113
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information