MetaCyc Pathway: L-citrulline degradation in Escherichia coli BW25113
| Ornithine carbamoyltransferase (in reverse): L-citrulline + H+ + phosphate→carbamoyl phosphate + L-ornithine (EC 2.1.3.3) |
| b0273 (argF) |
| b4254 (argI) |
| Carbamate kinase (in reverse): carbamoyl phosphate + ADP→carbamate + ATP (EC 2.7.2.2; 6.3.4.16; 6.3.5.5) |
| b0032 (carA) |
| b0033 (carB) |
| b0323 (yahI) |
| b0521 (ybcF) |
| b2874 (yqeA) |
| carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104) |
| b0340 (cynS) |
| b0711 (ybgJ) |
| b0712 (ybgK) |
Links:
- Pathway details at MetaCyc
- Fitness data for 10 genes
- All MetaCyc pathways for Escherichia coli BW25113
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information