MetaCyc Pathway: allantoin degradation IV (anaerobic) in Escherichia coli ECRC102

Add experiment(s):


(S)-(+)-allantoin[out] + H+[out]→(S)-(+)-allantoin[in] + H+[in]
NIAGMN_05960 (ybbW)
Allantoinase:
(S)-(+)-allantoin + H2O→allantoate + H+ (EC 3.5.2.5)
NIAGMN_05950 (allB)
NIAGMN_05955 (allB)
Allantoate deiminase:
allantoate + 2 H+ + H2O→(S)-ureidoglycine + ammonium + CO2 (EC 3.5.3.9)
NIAGMN_05925 (allC)
(S)-ureidoglycine + H2O→(S)-ureidoglycolate + ammonium (EC 3.5.3.26)
NIAGMN_05925 (allC)
NIAGMN_05930 (allE)
Ureidoglycolate dehydrogenase:
(S)-ureidoglycolate + NAD(P)+→N-carbamoyl-2-oxoglycine + NAD(P)H + H+ (EC 1.1.1.154)
NIAGMN_05920 (allD)
(S)-ureidoglycolate + NAD+→N-carbamoyl-2-oxoglycine + NADH + H+ (EC 1.1.1.350)
NIAGMN_05920 (allD)
Oxamate carbamoyltransferase (in reverse):
N-carbamoyl-2-oxoglycine + phosphate→carbamoyl phosphate + oxamate (EC 2.1.3.5)
No genes
Carbamate kinase (in reverse):
carbamoyl phosphate + ADP→carbamate + ATP (EC 2.7.2.2; 6.3.4.16; 6.3.5.5)
NIAGMN_05900 (arcC)
NIAGMN_07020 (yahI)
NIAGMN_08790 (carB)
NIAGMN_08795 (carA)
NIAGMN_17440 (arcC)
carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104)
NIAGMN_05055 (pxpC)
NIAGMN_05060 (pxpB)
NIAGMN_06885 (cynS)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information