MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, NAD-ME type in Escherichia coli ECRC101

Add experiment(s):


Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogen carbonate + H+
(EC 4.2.1.1)
OKFHMN_08835 (cynT)
OKFHMN_10440 (can)
Phosphoenolpyruvate carboxylase (in reverse):
hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate
(EC 4.1.1.31)
OKFHMN_13595 (ppc)
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate
(EC 2.6.1.1)
OKFHMN_01580 (ydcR)
OKFHMN_05385 (aspC)
OKFHMN_11450 (yjiR)
OKFHMN_20855 (aRO8)
L-aspartate[in]→L-aspartate[out]
No genes
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate
(EC 2.6.1.1)
OKFHMN_01580 (ydcR)
OKFHMN_05385 (aspC)
OKFHMN_11450 (yjiR)
OKFHMN_20855 (aRO8)
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+
(EC 1.1.1.37; 1.1.1.38)
OKFHMN_01360 (maeA)
OKFHMN_06270 (hcxB)
OKFHMN_17795 (mdh)
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→CO2 + pyruvate + NADH
(EC 1.1.1.38)
OKFHMN_01360 (maeA)
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate
(EC 2.6.1.2)
OKFHMN_22370 (alaC)
OKFHMN_22825 (alaA)
L-alanine[in]→L-alanine[out]
No genes
Alanine transaminase (in reverse):
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate
(EC 2.6.1.2)
OKFHMN_22825 (alaA)
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+
(EC 2.7.9.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information