MetaCyc Pathway: L-lyxose degradation in Escherichia coli ECOR38

Add experiment(s):


β-L-lyxopyranose→L-xylulose
HEPCGN_12540 (rhaA)
L-xylulokinase:
L-xylulose + ATP→L-xylulose 5-phosphate + ADP + H+ (EC 2.7.1.53)
HEPCGN_14760 (lyxK)
L-ribulose-5-phosphate 3-epimerase (in reverse):
L-xylulose 5-phosphate→L-ribulose 5-phosphate (EC 5.1.3.22)
HEPCGN_10360 (ulaE)
HEPCGN_14750 (sgbU)
L-ribulose-5-phosphate 4-epimerase:
L-ribulose 5-phosphate→D-xylulose 5-phosphate (EC 5.1.3.4)
HEPCGN_08780 (araD)
HEPCGN_10355 (ulaF)
HEPCGN_14745 (araD)

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information