MetaCyc Pathway: superpathway of pyrimidine ribonucleosides salvage in Echinicola vietnamensis KMM 6221, DSM 17526

Add experiment(s):


Cytidine deaminase:
cytidine + H+ + H2O→uridine + ammonium
(EC 3.5.4.5)
Echvi_1816
cytidine + ATP→CMP + ADP + H+ (EC 2.7.1.213; 2.7.1.48)
Echvi_1181
Cytidylate kinase:
CMP + ATP→CDP + ADP
(EC 2.7.4.14; 2.7.4.25)
Echvi_2010
Uridine nucleosidase:
uridine + H2O→uracil + D-ribofuranose
(EC 3.2.2.3)
No genes
Uridine kinase:
uridine + ATP→UMP + ADP + H+
(EC 2.7.1.48)
Echvi_1181
Nucleoside-diphosphate kinase:
CDP + ATP→CTP + ADP
(EC 2.7.4.6)
Echvi_0995
Uracil phosphoribosyltransferase (in reverse):
uracil + 5-phospho-α-D-ribose 1-diphosphate→UMP + diphosphate
(EC 2.4.2.9)
Echvi_0597
Echvi_1835
Echvi_4662
Cytidylate kinase:
UMP + ATP→UDP + ADP
(EC 2.7.4.14; 2.7.4.22)
Echvi_0276
Echvi_2010
Nucleoside-diphosphate kinase:
UDP + ATP→UTP + ADP
(EC 2.7.4.6)
Echvi_0995
CTP synthase:
UTP + ATP + L-glutamine + H2O→CTP + ADP + L-glutamate + 2 H+ + phosphate
(EC 6.3.4.2)
Echvi_2400

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information