MetaCyc Pathway: formaldehyde assimilation II (assimilatory RuMP Cycle) in Echinicola vietnamensis KMM 6221, DSM 17526

6-phosphofructokinase: β-D-fructofuranose 6-phosphate + ATP→β-D-fructofuranose 1,6-bisphosphate + ADP + H+ (EC 2.7.1.11)

Echvi_2325

Echvi_2380

Echvi_3160

3-hexulose-6-phosphate synthase (in reverse): formaldehyde + D-ribulose 5-phosphate→hexulose 6-phosphate (EC 4.1.2.43)

Echvi_3532

Fructose-bisphosphate aldolase: β-D-fructofuranose 1,6-bisphosphate→glycerone phosphate + D-glyceraldehyde 3-phosphate (EC 4.1.2.13)

Echvi_0155

Echvi_2849

Echvi_3158

6-phospho-3-hexuloisomerase: hexulose 6-phosphate→β-D-fructofuranose 6-phosphate (EC 5.3.1.27)

Echvi_3533

Transketolase (in reverse): β-D-fructofuranose 6-phosphate + D-glyceraldehyde 3-phosphate→D-erythrose 4-phosphate + D-xylulose 5-phosphate (EC 2.2.1.1)

Echvi_1285

Echvi_1286

Echvi_2926

Echvi_2927

Transaldolase (in reverse): D-erythrose 4-phosphate + β-D-fructofuranose 6-phosphate→D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate (EC 2.2.1.2)

Echvi_2500

Transketolase: D-sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate→D-xylulose 5-phosphate + D-ribose 5-phosphate (EC 2.2.1.1)

Echvi_1285

Echvi_1286

Echvi_2926

Echvi_2927

Ribose-5-phosphate isomerase: D-ribose 5-phosphate→D-ribulose 5-phosphate (EC 5.3.1.6)

Echvi_1186

Echvi_2860

Ribulose-phosphate 3-epimerase (in reverse): D-xylulose 5-phosphate→D-ribulose 5-phosphate (EC 5.1.3.1)

Echvi_3575

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information