MetaCyc Pathway: xyloglucan degradation II (exoglucanase) in Phocaeicola dorei CL03T12C01

MetaCyc Pathway: xyloglucan degradation II (exoglucanase) in Phocaeicola dorei CL03T12C01

Xyloglucan-specific endo-beta-1,4-glucanase:
a xyloglucan + n H₂O→n XLXG xyloglucan oligosaccharide + n XLFG xyloglucan oligosaccharide + n XXFG xyloglucan oligosaccharide (EC 3.2.1.151)

No genes

Beta-galactosidase:
XLXG xyloglucan oligosaccharide + H₂O→XXXG xyloglucan oligosaccharide + D-galactopyranose (EC 3.2.1.23)

Alpha-L-fucosidase:
XXFG xyloglucan oligosaccharide + H₂O→XXLG xyloglucan oligosaccharide + L-fucopyranose (EC 3.2.1.51)

Alpha-L-fucosidase:
XLFG xyloglucan oligosaccharide + H₂O→XLLG xyloglucan oligosaccharide + L-fucopyranose (EC 3.2.1.51)

Beta-galactosidase:
XXLG xyloglucan oligosaccharide + H₂O→XXXG xyloglucan oligosaccharide + D-galactopyranose (EC 3.2.1.23)

Beta-galactosidase:
XLLG xyloglucan oligosaccharide + 2 H₂O→XXXG xyloglucan oligosaccharide + 2 D-galactopyranose (EC 3.2.1.23)

Oligoxyloglucan beta-glycosidase:
XXXG xyloglucan oligosaccharide + 3 H₂O→3 isoprimeverose + D-glucopyranose (EC 3.2.1.120)

No genes

isoprimeverose + H₂O→α-D-xylopyranose + D-glucopyranose (EC 3.2.1.177)

No genes

Links:

Pathway details at MetaCyc
Fitness data for 35 genes
Select organism:
All MetaCyc pathways for Phocaeicola dorei CL03T12C01

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information