MetaCyc Pathway: guanosine deoxyribonucleotides de novo biosynthesis II in Escherichia coli BL21

Add experiment(s):


Ribonucleoside-diphosphate reductase (in reverse):
GDP + a reduced thioredoxin→dGDP + an oxidized thioredoxin + H2O
(EC 1.17.4.1)
ECD_02160
ECD_02161
ECD_02530
ECD_02531
ECD_02532
Ribonucleoside-diphosphate reductase (in reverse):
GDP + a reduced NrdH glutaredoxin-like protein→dGDP + an oxidized NrdH glutaredoxin-like protein + H2O
(EC 1.17.4.1)
ECD_02160
ECD_02161
ECD_02531
ECD_02532
Nucleoside-diphosphate kinase:
dGDP + ATP→dGTP + ADP
(EC 2.7.4.6)
ECD_00425
ECD_02410
GTP + formate + H+→dGTP + CO2 + H2O (EC 1.1.98.6)
ECD_04106

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information