MetaCyc Pathway: (5Z)-dodecenoate biosynthesis I in Azospirillum sp. SherDot2

Add experiment(s):


3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydecanoyl-[acp]→a (2E)-dec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Trans-2-decenoyl-[acyl-carrier-protein] isomerase:
a (2E)-dec-2-enoyl-[acp]→a (3Z)-dec-3-enoyl-[acp] (EC 5.3.3.14)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase II:
a (3Z)-dec-3-enoyl-[acp] + a malonyl-[acp] + H+→a (5Z)-3-oxododec-5-enoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a (5Z)-3-oxododec-5-enoyl-[acp] + NADPH + H+→a (3R,5Z)-3-hydroxydodec-5-enoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R,5Z)-3-hydroxydodec-5-enoyl-[acp]→a (2E,5Z)-dodeca-3,5-dienoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E,5Z)-dodeca-3,5-dienoyl-[acp] + NADH + H+→a (5Z)-dodec-5-enoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information