MetaCyc Pathway: superpathway of fatty acid biosynthesis II (plant) in Azospirillum sp. SherDot2

Add experiment(s):


acetyl-CoA + a [carboxyl-carrier protein dimer]-N6-carboxybiotinyl-L-lysine→malonyl-CoA + a [biotin carboxyl-carrier-protein dimer]-N6-biotinyl-L-lysine (EC 2.1.3.15)
MPMX19_02141
[Acyl-carrier-protein] S-malonyltransferase:
malonyl-CoA + a soluble [acyl-carrier protein]→a malonyl-[acp] + coenzyme A (EC 2.3.1.39)
MPMX19_00937
MPMX19_02833
Beta-ketoacyl-acyl-carrier-protein synthase III:
acetyl-CoA + a malonyl-[acp] + H+→an acetoacetyl-[acp] + CO2 + coenzyme A (EC 2.3.1.180)
MPMX19_00742
MPMX19_04206
MPMX19_06581
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
an acetoacetyl-[acp] + NADPH + H+→a (3R)-3-hydroxybutanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxybutanoyl-[acp]→a (2E)-but-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-but-2-enoyl-[acp] + NADH + H+→a butanoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Beta-ketoacyl-acyl-carrier-protein synthase II:
a butanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxohexanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxohexanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyhexanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyhexanoyl-[acp]→a (2E)-hex-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-hex-2-enoyl-[acp] + NADH + H+→a hexanoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Beta-ketoacyl-acyl-carrier-protein synthase II:
a hexanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxooctanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxooctanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyoctanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyoctanoyl-[acp]→a (2E)-oct-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-oct-2-enoyl-[acp] + NADH + H+→an octanoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Beta-ketoacyl-acyl-carrier-protein synthase II:
an octanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxodecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxydecanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydecanoyl-[acp]→a (2E)-dec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-dec-2-enoyl-[acp] + NADH + H+→a decanoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Beta-ketoacyl-acyl-carrier-protein synthase II:
a decanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxododecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxododecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxydodecanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydodecanoyl-[acp]→a (2E)-dodec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-dodec-2-enoyl-[acp] + NADH + H+→a dodecanoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Dodecanoyl-[acyl-carrier-protein] hydrolase:
a dodecanoyl-[acp][nil] + H2O[nil]→laurate[nil] + a soluble [acyl-carrier protein][nil] + H+[nil] (EC 3.1.2.21)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase II:
a dodecanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxotetradecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
Butyrate--CoA ligase:
laurate + ATP + coenzyme A→lauroyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
MPMX19_02151
MPMX19_03344
MPMX19_03952
MPMX19_05315
MPMX19_06871
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxotetradecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxytetradecanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxytetradecanoyl-[acp]→a (2E)-tetradec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-tetradec-2-enoyl-[acp] + NADH + H+→a myristoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Beta-ketoacyl-acyl-carrier-protein synthase II:
a myristoyl-[acp] + a malonyl-[acp] + H+→a 3-oxohexadecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
MPMX19_00940
MPMX19_02497
MPMX19_03110
MPMX19_03664
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxohexadecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyhexadecanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyhexadecanoyl-[acp]→a (2E)-hexadec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-hexadec-2-enoyl-[acp] + NADH + H+→a palmitoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Oleoyl-[acyl-carrier-protein] hydrolase:
a palmitoyl-[acp] + H2O→palmitate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase I:
a palmitoyl-[acp] + a malonyl-[acp] + H+→a 3-oxooctadecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.41)
MPMX19_03664
Long-chain-fatty-acid--CoA ligase:
palmitate + ATP + coenzyme A→palmitoyl-CoA + AMP + diphosphate (EC 6.2.1.3)
MPMX19_02151
MPMX19_03344
MPMX19_03952
MPMX19_04516
MPMX19_05315
MPMX19_06871
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxooctadecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyoctadecanoyl-[acp] + NADP+ (EC 1.1.1.100)
MPMX19_00938
MPMX19_01147
MPMX19_01299
MPMX19_02782
MPMX19_02788
MPMX19_02816
MPMX19_02999
MPMX19_03000
MPMX19_03169
MPMX19_03216
MPMX19_03281
MPMX19_03548
MPMX19_03667
MPMX19_03857
MPMX19_03871
MPMX19_03919
MPMX19_04140
MPMX19_04205
MPMX19_04522
MPMX19_04767
MPMX19_04816
MPMX19_04993
MPMX19_05226
MPMX19_05469
MPMX19_05644
MPMX19_06770
MPMX19_06773
MPMX19_06974
MPMX19_06989
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyoctadecanoyl-[acp]→a (2E)-octadec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
MPMX19_00999
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-octadec-2-enoyl-[acp] + NADH + H+→a stearoyl-[acp] + NAD+ (EC 1.3.1.9)
MPMX19_00643
MPMX19_00709
MPMX19_01781
MPMX19_02674
MPMX19_03357
MPMX19_04273
Acyl-[acyl-carrier-protein] desaturase:
a stearoyl-[acp] + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→an oleoyl-[acp] + 2 an oxidized ferredoxin [iron-sulfur] cluster + 2 H2O (EC 1.14.19.2)
No genes
Oleoyl-[acyl-carrier-protein] hydrolase:
a stearoyl-[acp] + H2O→stearate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes
Oleoyl-[acyl-carrier-protein] hydrolase:
an oleoyl-[acp] + H2O→oleate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes
Long-chain-fatty-acid--CoA ligase:
stearate + ATP + coenzyme A→stearoyl-CoA + AMP + diphosphate (EC 6.2.1.3)
MPMX19_02151
MPMX19_03344
MPMX19_03952
MPMX19_05315
MPMX19_06871
Long-chain-fatty-acid--CoA ligase:
oleate + ATP + coenzyme A→oleoyl-CoA + AMP + diphosphate (EC 6.2.1.3)
MPMX19_02151
MPMX19_03344
MPMX19_03952
MPMX19_05315
MPMX19_06871

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information