MetaCyc Pathway: aerobic respiration I (cytochrome c) in Dickeya dadantii 3937

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Reactions and Genes Upstate
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NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
DDA3937_RS05235 +0.1
DDA3937_RS13040 -0.5
DDA3937_RS14275 N.D.
DDA3937_RS14280 N.D.
DDA3937_RS14285 N.D.
DDA3937_RS14290 N.D.
DDA3937_RS14295 N.D.
DDA3937_RS14300 N.D.
DDA3937_RS14305 N.D.
DDA3937_RS14310 N.D.
DDA3937_RS14315 N.D.
DDA3937_RS14320 N.D.
DDA3937_RS14325 N.D.
DDA3937_RS14330 N.D.
DDA3937_RS14335 N.D.
DDA3937_RS14875 -0.0
DDA3937_RS20275 +0.2
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
DDA3937_RS06450 -0.0
DDA3937_RS18965 -1.3
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information