MetaCyc Pathway: formate to nitrite electron transfer in Dickeya dadantii 3937

Reactions and Genes	PDB
	remove
formate_[out] + a menaquinone + 2 H⁺_[in]→a menaquinol + CO₂_[out] + H⁺_[out] (EC 1.17.5.3)
DDA3937_RS07850	-0.0
DDA3937_RS07855	+0.4
DDA3937_RS07860	+0.3
DDA3937_RS14165	+1.4
DDA3937_RS14170	+1.1
DDA3937_RS14175	+1.2
a menaquinol + 2 an oxidized [NrfB protein]_[out]→2 a reduced [NrfB protein]_[out] + a menaquinone + 2 H⁺_[out] (EC 7.1.1.8)
No genes
Nitrite reductase (cytochrome; ammonia-forming): 6 a reduced [NrfB protein]_[out] + nitrite_[out] + 8 H⁺_[out]→6 an oxidized [NrfB protein]_[out] + ammonium_[out] + 2 H₂O_[out] (EC 1.7.2.2)
DDA3937_RS04580	+0.2

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Pathway details at MetaCyc
Fitness data for 7 genes
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All MetaCyc pathways for Dickeya dadantii 3937

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information