MetaCyc Pathway: purine ribonucleosides degradation in Escherichia coli BW25113
| Reactions and Genes | LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM |
|---|---|
| remove | |
| Adenosine deaminase: adenosine + H+ + H2O→inosine + ammonium (EC 3.5.4.4) | |
| b1623 (add) | -0.6 |
| b2593 (yfiH) | -0.4 |
| Purine-nucleoside phosphorylase: inosine + phosphate→α-D-ribose-1-phosphate + hypoxanthine (EC 2.4.2.1) | |
| b0391 (yaiE) | +0.2 |
| b2407 (xapA) | -0.1 |
| b2593 (yfiH) | -0.4 |
| b4384 (deoD) | -0.8 |
| Purine-nucleoside phosphorylase: xanthosine + phosphate→α-D-ribose-1-phosphate + xanthine (EC 2.4.2.1) | |
| b0391 (yaiE) | +0.2 |
| b2407 (xapA) | -0.1 |
| b4384 (deoD) | -0.8 |
| Purine-nucleoside phosphorylase: guanosine + phosphate→α-D-ribose-1-phosphate + guanine (EC 2.4.2.1; 2.4.2.15) | |
| b0391 (yaiE) | +0.2 |
| b2407 (xapA) | -0.1 |
| b4384 (deoD) | -0.8 |
| Purine-nucleoside phosphorylase: adenosine + phosphate→α-D-ribose-1-phosphate + adenine (EC 2.4.2.1) | |
| b0391 (yaiE) | +0.2 |
| b2407 (xapA) | -0.1 |
| b2593 (yfiH) | -0.4 |
| b4384 (deoD) | -0.8 |
| Phosphopentomutase: α-D-ribose-1-phosphate→D-ribose 5-phosphate (EC 5.4.2.7) | |
| b3380 (yhfW) | -0.6 |
| b4383 (deoB) | -1.4 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information