MetaCyc Pathway: oxalate degradation VI in Escherichia coli BW25113
| Reactions and Genes | LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM |
|---|---|
| remove | |
| Oxalate--CoA ligase: oxalate + ATP + coenzyme A→oxalyl-CoA + AMP + diphosphate (EC 6.2.1.8) | |
| No genes | |
| Oxalyl-CoA decarboxylase: oxalyl-CoA + H+→CO2 + formyl-CoA (EC 4.1.1.8) | |
| b2373 (oxc) | +0.0 |
| Formyl-CoA hydrolase: formyl-CoA + H2O→formate + coenzyme A + H+ (EC 3.1.2.10) | |
| No genes | |
| formate + NAD+→CO2 + NADH (EC 1.17.1.9) | |
| b1476 (fdnI) | -1.1 |
| b1499 (ydeO) | -0.1 |
| b1501 (YdeP) | +0.3 |
| b3892 (fdoI) | +1.4 |
| b3893 (fdoH) | +1.3 |
| b3895 (fdhD) | +0.7 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information