MetaCyc Pathway: adenosine nucleotides degradation I in Pseudomonas simiae WCS417

Add experiment(s):


Reactions and Genes Deoxyribonucleic from herring sperm 5 mg/mL (C)
remove
Adenosine-phosphate deaminase:
AMP + H+ + H2O→IMP + ammonium (EC 3.5.4.17; 3.5.4.6)
No genes
IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+ (EC 1.1.1.205)
PS417_10545 N.D.
PS417_23075 N.D.
5'-nucleotidase:
IMP + H2O→inosine + phosphate (EC 3.1.3.5; 3.1.3.99)
PS417_06350 -0.1
PS417_08450 +0.2
PS417_01285 +0.7
Inosine nucleosidase:
inosine + H2O→hypoxanthine + D-ribofuranose (EC 3.2.2.2)
PS417_12990 +0.1
PS417_18375 -0.1
5'-nucleotidase:
XMP + H2O→xanthosine + phosphate (EC 3.1.3.5)
PS417_06350 -0.1
PS417_08450 +0.2
Xanthine dehydrogenase:
hypoxanthine + NAD+ + H2O→xanthine + NADH + H+ (EC 1.17.1.4)
PS417_20885 -1.3
PS417_20890 -1.5
PS417_24360 +0.2
PS417_24365 -0.2
Purine nucleosidase:
xanthosine + H2O→xanthine + D-ribofuranose (EC 3.2.2.1)
PS417_12990 +0.1
PS417_18375 -0.1
Xanthine dehydrogenase:
xanthine + NAD+ + H2O→urate + NADH + H+ (EC 1.17.1.4)
PS417_20885 -1.3
PS417_20890 -1.5
PS417_24360 +0.2
PS417_24365 -0.2

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information