MetaCyc Pathway: limonene degradation IV (anaerobic) in Pseudomonas putida KT2440

Reactions and Genes	D-Lysine 10 mM (C)
limonene + an oxidized electron carrier + H2O→perillyl alcohol + a reduced two electron carrier (EC 1.17.99.8)
No genes
Perillyl-alcohol dehydrogenase: perillyl alcohol + NAD+→perillyl aldehyde + NADH + H+ (EC 1.1.1.144)
No genes
Aldehyde dehydrogenase (NAD(+)): perillyl aldehyde + NAD+ + H2O→perillate + NADH + 2 H+ (EC 1.2.1.3)
PP_0545	-0.1
PP_0665	-0.0
PP_0708	-0.0
PP_1948	-0.1
PP_2487	-0.1
PP_2589	+0.1
PP_2680	-0.2
PP_2694	+0.1
PP_3270	-0.3
PP_3463	-0.2
PP_3646	-0.2
PP_5258	-4.2
PP_5278	-0.0
PP_5372	-0.1
perillate + ATP + coenzyme A→perillyl-CoA + AMP + diphosphate (EC 6.2.1.M31)
No genes
perillyl-CoA + H2O→2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA
No genes
2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA + NAD+→2-oxo-4-Isopropenylcyclohexane-1-carboxyl-CoA + NADH + H+
No genes
2-oxo-4-Isopropenylcyclohexane-1-carboxyl-CoA + H2O→4-(isopropenyl)pimeloyl-CoA + H+
No genes

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information