MetaCyc Pathway: L-arginine degradation V (arginine deiminase pathway) in Pseudomonas putida KT2440

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Reactions and Genes 3-methyl-1-butanol 0.1 vol% (C)
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Arginine deiminase:
L-arginine + H2O→L-citrulline + ammonium (EC 3.5.3.6)
PP_1001 +0.2
Ornithine carbamoyltransferase (in reverse):
L-citrulline + H+ + phosphate→carbamoyl phosphate + L-ornithine (EC 2.1.3.3)
PP_1000 +0.6
PP_1079 -5.5
Carbamate kinase (in reverse):
carbamoyl phosphate + ADP→carbamate + ATP (EC 2.7.2.2; 6.3.4.16; 6.3.5.5)
PP_0999 +0.3
PP_4723 -4.5
PP_4724 -4.1
carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104)
PP_2921 -0.2
PP_2922 -0.0
PP_4575 +1.6
PP_4576 +2.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information