MetaCyc Pathway: L-tyrosine biosynthesis I in Pseudomonas simiae WCS417

Add experiment(s):


Reactions and Genes LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x
remove
Chorismate mutase:
chorismate→prephenate (EC 5.4.99.5)
PS417_08125 -5.4
PS417_01650 -0.2
Prephenate dehydrogenase:
prephenate + NAD+→3-(4-hydroxyphenyl)pyruvate + CO2 + NADH (EC 1.3.1.12)
PS417_08135 -1.3
Aspartate transaminase (in reverse):
3-(4-hydroxyphenyl)pyruvate + L-glutamate→L-tyrosine + 2-oxoglutarate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
PS417_08130 -0.2
PS417_08560 -0.0
PS417_09070 -0.2
PS417_09120 +0.2
PS417_11840 +0.1
PS417_12775 +0.2
PS417_12985 -0.1
PS417_13545 +0.4
PS417_14865 -0.1
PS417_15040 +0.1
PS417_15990 -0.0
PS417_18690 -0.1
PS417_19025 -0.1
PS417_19385 +0.0
PS417_19910 +0.1
PS417_21030 -0.1
PS417_21275 +3.0
PS417_23120 -0.0
PS417_23365 -0.3
PS417_27730 +0.2
PS417_28165 +0.3
PS417_04425 +0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information