MetaCyc Pathway: L-glutamate degradation II in Pseudomonas simiae WCS417

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Reactions and Genes LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x
remove
Aspartate transaminase (in reverse):
L-glutamate + oxaloacetate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
PS417_08560 -0.0
PS417_09070 -0.2
PS417_09120 +0.2
PS417_11840 +0.1
PS417_12775 +0.2
PS417_12985 -0.1
PS417_13545 +0.4
PS417_14865 -0.1
PS417_15040 +0.1
PS417_15990 -0.0
PS417_19025 -0.1
PS417_19385 +0.0
PS417_19910 +0.1
PS417_21030 -0.1
PS417_21275 +3.0
PS417_23120 -0.0
PS417_27730 +0.2
PS417_28165 +0.3
Aspartate ammonia-lyase:
L-aspartate→fumarate + ammonium (EC 4.3.1.1)
PS417_28130 N.D.

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information