MetaCyc Pathway: fatty acid salvage in Pseudomonas sp. RS175

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Reactions and Genes butyrate (C)
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Butyrate--CoA ligase:
decanoate + ATP + coenzyme A→decanoyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
PFR28_00584 -0.0
PFR28_00585 +0.5
PFR28_01261 +0.0
PFR28_03122 +0.2
decanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-dec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.7)
PFR28_03037 -0.3
PFR28_03841 +0.1
PFR28_04093 -1.4
PFR28_04094 +0.3
PFR28_04096 +0.0
PFR28_05052 -0.2
Long-chain-enoyl-CoA hydratase (in reverse):
(2E)-dec-2-enoyl-CoA + H2O→(S)-3-hydroxydecanoyl-CoA (EC 4.2.1.74)
PFR28_00676 -0.2
PFR28_01110 +0.3
PFR28_02951 +0.4
PFR28_04878 +0.0
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxydecanoyl-CoA + NAD+→3-oxodecanoyl-CoA + NADH + H+ (EC 1.1.1.35)
PFR28_01110 +0.3
PFR28_02961 +0.0
PFR28_04157 -0.3
PFR28_04878 +0.0
Acetyl-CoA C-acyltransferase (in reverse):
3-oxodecanoyl-CoA + coenzyme A→octanoyl-CoA + acetyl-CoA (EC 2.3.1.16)
PFR28_00622 -0.7
PFR28_00886 -0.2
PFR28_01111 -0.3
PFR28_01323 -0.2
PFR28_01882 -0.1
PFR28_02061 -0.7
PFR28_02962 -0.3
PFR28_05239 -0.4
octanoyl-CoA + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.207)
PFR28_00740 +0.3

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information