MetaCyc Pathway: fatty acid β-oxidation II (plant peroxisome) in Pseudomonas simiae WCS417

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Reactions and Genes 2-Deoxy-D-ribonic lithium salt (C)
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a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate
No genes
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide
(EC 1.3.3.6)
No genes
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
PS417_07030 -0.2
PS417_07575 -0.1
PS417_08535 +0.2
PS417_10680 -0.5
PS417_11445 -0.3
PS417_12870 -0.2
PS417_13835 -0.1
PS417_13845 N.D.
PS417_21195 -0.2
PS417_21215 -0.0
PS417_22625 -0.1
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+
(EC 1.1.1.35)
PS417_07575 -0.1
PS417_21215 -0.0
PS417_26285 -0.2
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA
(EC 2.3.1.16)
PS417_06710 +0.3
PS417_07580 N.D.
PS417_10515 -3.2
PS417_13855 +0.2
PS417_15175 N.D.
PS417_19210 -0.0
PS417_21220 +0.3
PS417_03145 -0.5

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information