| Reactions and Genes | Vanillic Acid (C) |
|---|
| remove |
| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Dodecenoyl-CoA isomerase:
a (3Z)-3-enoyl-CoA→a (2E)-2-enoyl-CoA (EC 5.3.3.8) |
| PP_2047 | +0.0 |
| PP_2136 | +0.1 |
3-hydroxybutyryl-CoA epimerase:
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 5.1.2.3) |
| PP_2047 | +0.0 |
| PP_2136 | +0.1 |
| a 2,3,4-saturated fatty acyl CoA + an oxidized electron-transfer flavoprotein + H+→a (2E)-2-enoyl-CoA + a reduced electron-transfer flavoprotein |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| PP_1412 | -0.2 |
| PP_1845 | +0.0 |
| PP_2047 | +0.0 |
| PP_2136 | +0.1 |
| PP_2217 | -1.9 |
| PP_3283 | -0.0 |
| PP_3284 | -0.3 |
| PP_3358 | -0.1 |
| PP_3491 | -0.3 |
| PP_3726 | +0.3 |
| PP_3732 | -0.1 |
| PP_4030 | +0.2 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| PP_2047 | +0.0 |
| PP_2136 | +0.1 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| PP_0582 | +0.1 |
| PP_1377 | -2.9 |
| PP_2051 | -0.2 |
| PP_2137 | +0.2 |
| PP_2215 | -1.1 |
| PP_3280 | -0.2 |
| PP_3355 | +0.2 |
| PP_3754 | -0.2 |
| PP_4636 | +0.3 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information