MetaCyc Pathway: superpathway of L-aspartate and L-asparagine biosynthesis in Agrobacterium fabrum C58

Add experiment(s):


Reactions and Genes Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
remove
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
Atu0235 +0.0
Atu0529 +0.1
Atu1589 -0.9
Atu1848 -0.0
Atu2196 N.D.
Atu4266 +0.6
Atu4278 -0.1
Aspartate ammonia-lyase (in reverse):
fumarate + ammonium→L-aspartate (EC 4.3.1.1)
Atu3793 +0.1
Aspartate--ammonia ligase:
L-aspartate + ammonium + ATP→L-asparagine + AMP + diphosphate + H+ (EC 6.3.1.1)
No genes
Asparaginase:
L-asparagine + H2O→L-aspartate + ammonium (EC 3.5.1.1; 3.5.1.38; 3.5.5.4)
Atu3791 +1.4

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information