MetaCyc Pathway: 2-deoxy-α-D-ribose 1-phosphate degradation in Escherichia coli BW25113

Add experiment(s):


Reactions and Genes Ying_Nucleobase14 rep A; time point 2
remove
Phosphopentomutase:
2-deoxy-α-D-ribose 1-phosphate→2-deoxy-D-ribose 5-phosphate (EC 5.4.2.7)
b3380 (yhfW) -0.0
b4383 (deoB) -7.6
Deoxyribose-phosphate aldolase:
2-deoxy-D-ribose 5-phosphate→acetaldehyde + D-glyceraldehyde 3-phosphate (EC 4.1.2.4)
b4381 (deoC) +1.4
Acetaldehyde dehydrogenase (acetylating):
acetaldehyde + coenzyme A + NAD+→acetyl-CoA + NADH + H+ (EC 1.2.1.10)
b0351 (mhpF) -0.1
b1241 (adhE) +0.2
b2455 (eutE) -0.0

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information