MetaCyc Pathway: aerobic respiration III (alternative oxidase pathway) in Escherichia coli BW25113
| Reactions and Genes | M9 no stress control; Anaerobic 24 hr |
|---|---|
| remove | |
| NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2) | |
| b1109 (ndh) | -0.0 |
| b2276 (nuoN) | +0.4 |
| b2277 (nuoM) | +0.3 |
| b2278 (nuoL) | +0.3 |
| b2279 (nuoK) | +0.7 |
| b2280 (nuoJ) | +0.4 |
| b2282 (nuoH) | +0.4 |
| b2283 (nuoG) | +0.5 |
| b2284 (nuoF) | +0.3 |
| b2285 (nuoE) | +0.3 |
| b2286 (nuoC) | +0.6 |
| b2287 (nuoB) | +0.7 |
| b2288 (nuoA) | +0.4 |
| Succinate dehydrogenase (ubiquinone): succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1) | |
| b0723 (sdhA) | -0.1 |
| b4154 (frdA) | +1.6 |
| 2 a ubiquinol + dioxygen[in]→2 H2O[in] + 2 a ubiquinone (EC 1.10.3.11) | |
| No genes | |
Links:
- Pathway details at MetaCyc
- Fitness data for 15 genes
- All MetaCyc pathways for Escherichia coli BW25113
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information