MetaCyc Pathway: L-ornithine biosynthesis I in Variovorax sp. OAS795

Add experiment(s):


Reactions and Genes Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
remove
Amino-acid N-acetyltransferase:
L-glutamate + acetyl-CoAN-acetyl-L-glutamate + coenzyme A + H+
(EC 2.3.1.1)
ABID97_RS16620 N.D.
ABID97_RS23485 -0.9
Acetylglutamate kinase:
N-acetyl-L-glutamate + ATPN-acetylglutamyl-phosphate + ADP
(EC 2.7.2.8)
ABID97_RS05760 N.D.
N-acetyl-gamma-glutamyl-phosphate reductase (in reverse):
N-acetylglutamyl-phosphate + NADPH + H+N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate
(EC 1.2.1.38)
ABID97_RS02250 N.D.
Acetylornithine transaminase (in reverse):
N-acetyl-L-glutamate 5-semialdehyde + L-glutamate→N-acetyl-L-ornithine + 2-oxoglutarate
(EC 2.6.1.11)
ABID97_RS08635 N.D.
Acetylornithine deacetylase:
N-acetyl-L-ornithine + H2O→L-ornithine + acetate
(EC 3.5.1.16)
ABID97_RS04175 -0.0
ABID97_RS11685 -0.2
ABID97_RS22220 -2.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information