MetaCyc Pathway: glycerol and glycerophosphodiester degradation in Escherichia coli BW25113

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Reactions and Genes 2,4-Dinitrophenol 2 mM
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Glycerophosphodiester phosphodiesterase:
an sn-glycerol 3-phosphate + H2O→sn-glycerol 3-phosphate + an alcohol + H+ (EC 3.1.4.46)
b2239 (glpQ) -0.5
b3449 (ugpQ) -0.2
glycerol[out]→glycerol[in]
b3927 (glpF) +0.4
Glycerol kinase:
glycerol + ATP→sn-glycerol 3-phosphate + ADP + H+ (EC 2.7.1.30)
b3926 (glpK) -2.1
Glycerol-3-phosphate dehydrogenase:
sn-glycerol 3-phosphate[in] + an electron-transfer quinone→glycerone phosphate[in] + an electron-transfer quinol (EC 1.1.5.3)
b2241 (glpA) +0.1
b2242 (glpB) +0.1
b2243 (glpC) -0.0
b3426 (glpD) -4.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information