MetaCyc Pathway: nitrate reduction III (dissimilatory) in Escherichia coli BW25113
| Reactions and Genes | 2,4-Dinitrophenol 2 mM |
|---|---|
| remove | |
| formate[out] + a menaquinone + 2 H+[in]→a menaquinol + CO2[out] + H+[out] (EC 1.17.5.3) | |
| b1474 (fdnG) | -0.1 |
| b1475 (fdnH) | +0.0 |
| b1476 (fdnI) | -0.4 |
| b3892 (fdoI) | -2.0 |
| b3893 (fdoH) | -1.7 |
| b3894 (fdoG) | -1.8 |
| a menaquinol + nitrate[in] + 2 H+[in]→nitrite[in] + a menaquinone + 2 H+[out] + H2O[in] (EC 1.7.5.1) | |
| b1225 (narH) | -0.6 |
| b1227 (narI) | +0.0 |
| b1465 (narV) | +0.5 |
| b1467 (narY) | -0.2 |
| b1468 (narZ) | -0.3 |
Links:
- Pathway details at MetaCyc
- Fitness data for 11 genes
- All MetaCyc pathways for Escherichia coli BW25113
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information