MetaCyc Pathway: oxalate degradation II in Variovorax sp. OAS795

Reactions and Genes	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
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Oxalate CoA-transferase: oxalate + succinyl-CoA→oxalyl-CoA + succinate (EC 2.8.3.2)
No genes
Oxalyl-CoA decarboxylase: oxalyl-CoA + H⁺→formyl-CoA + CO₂ (EC 4.1.1.8)
ABID97_RS24500	-1.7
Formyl-CoA transferase: formyl-CoA + oxalate→oxalyl-CoA + formate (EC 2.8.3.16)
ABID97_RS04215	+0.3
ABID97_RS05985	+0.3
ABID97_RS12440	-0.9
ABID97_RS19465	-0.4
ABID97_RS24485	-1.4
ABID97_RS24495	-0.7
ABID97_RS25985	-0.0
ABID97_RS26740	-0.2

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Pathway details at MetaCyc
Fitness data for 9 genes
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All MetaCyc pathways for Variovorax sp. OAS795

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information