MetaCyc Pathway: TCA cycle VIII (Chlamydia) in Pseudomonas fluorescens GW456-L13

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Reactions and Genes D-Serine (N)
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2-oxoglutarate + coenzyme A + NAD+→succinyl-CoA + CO2 + NADH (EC 1.2.1.105)
No genes
Succinate--CoA ligase (ADP-forming) (in reverse):
succinyl-CoA + ADP + phosphate→succinate + ATP + coenzyme A (EC 6.2.1.5)
PfGW456L13_4265 N.D.
PfGW456L13_4266 N.D.
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1)
PfGW456L13_4270 N.D.
PfGW456L13_4271 N.D.
PfGW456L13_4272 N.D.
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2)
PfGW456L13_1808 N.D.
PfGW456L13_2160 -0.2
PfGW456L13_5022 +0.0
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38)
No genes
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→2-oxoglutarate + L-aspartate (EC 2.6.1.1)
PfGW456L13_2059 +0.1
PfGW456L13_2142 -0.7
PfGW456L13_2252 -1.2
PfGW456L13_2943 -0.1
PfGW456L13_2947 +0.3
PfGW456L13_3163 +0.0
PfGW456L13_3206 -0.2
PfGW456L13_3261 +0.1
PfGW456L13_3292 +0.1
PfGW456L13_3363 +0.1
PfGW456L13_4175 -0.1
PfGW456L13_4396 -0.0
PfGW456L13_4856 +0.0
PfGW456L13_4919 -0.2
PfGW456L13_4930 -0.0
PfGW456L13_733 -0.1
PfGW456L13_807 -0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information