MetaCyc Pathway: L-asparagine biosynthesis III (tRNA-dependent) in Agrobacterium fabrum C58

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Reactions and Genes spermidine (N)
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Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
Atu0145 +0.1
Atu0281 N.D.
Atu0930 -0.0
Atu1154 -0.0
Atu1318 N.D.
Atu1319 N.D.
Atu1324 N.D.
Atu1618 N.D.
Atu1676 +0.2
Atu1859 -0.2
Atu2170 N.D.
Atu2178 N.D.
Atu2289 -2.3
Atu2658 +0.0
Atu3243 +0.0
Atu3369 -2.0
Atu3640 +0.2
Atu3783 -0.5
Atu3784 -0.4
Atu4228 -0.1
Atu4229 -0.2
Atu4441 +0.0
Atu4443 +0.1
Atu5476 +0.1
Aspartate--tRNA(Asn) ligase:
L-aspartate + tRNAAsn + ATP→an L-aspartyl-[tRNAAsn] + AMP + diphosphate (EC 6.1.1.23)
Atu1153 N.D.
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
an L-aspartyl-[tRNAAsn] + ATP→a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ADP (EC 6.3.5.6)
Atu1318 N.D.
Atu1319 N.D.
Atu1324 N.D.
Atu3243 +0.0
Atu4441 +0.0
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ammonia→an L-asparaginyl-[tRNAAsn] + phosphate (EC 6.3.5.6)
Atu1318 N.D.
Atu1319 N.D.
Atu1324 N.D.
Atu3243 +0.0
Atu4441 +0.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information