MetaCyc Pathway: anaerobic energy metabolism (invertebrates, cytosol) in Pseudomonas sp. RS175

Add experiment(s):


Reactions and Genes Ferulic Acid (C) 2.5 mM
remove
Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + GDP→oxaloacetate + GTP (EC 4.1.1.32)
No genes
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)
PFR28_03114 +0.0
PFR28_03455 -0.4
Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + IDP→oxaloacetate + ITP (EC 4.1.1.32)
No genes
Alanine transaminase (in reverse):
pyruvate + L-glutamate→2-oxoglutarate + L-alanine (EC 2.6.1.2)
PFR28_00596 +0.0
PFR28_00984 -0.2
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
No genes
Alanine racemase:
L-alanine→D-alanine (EC 5.1.1.1; 5.1.1.10)
PFR28_04397 N.D.
Aspartate transaminase:
2-oxoglutarate + L-aspartate→L-glutamate + oxaloacetate (EC 2.6.1.1)
PFR28_00302 -0.0
PFR28_00800 -1.4
PFR28_00984 -0.2
PFR28_01312 -0.7
PFR28_01605 +0.1
PFR28_01790 -0.1
PFR28_02468 +0.1
PFR28_02973 -0.5
PFR28_03061 -0.1
PFR28_03135 +0.2
PFR28_04404 +0.1
PFR28_04508 -0.2

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information