MetaCyc Pathway: pseudouridine degradation in Pseudomonas fluorescens GW456-L13

Add experiment(s):


Reactions and Genes Lomefloxacin 0.0004 mM
remove
Pseudouridine kinase:
pseudouridine + ATP→pseudouridine 5'-phosphate + ADP + H+ (EC 2.7.1.83)
No genes
Pseudouridylate synthase (in reverse):
pseudouridine 5'-phosphate + H2O→uracil + D-ribofuranose 5-phosphate (EC 4.2.1.70)
PfGW456L13_1389 +0.3
PfGW456L13_1493 N.D.
PfGW456L13_2097 +2.7
PfGW456L13_3941 +2.1
PfGW456L13_4194 -0.0
PfGW456L13_4401 +0.1
PfGW456L13_4535 -0.4
PfGW456L13_4655 -0.2
PfGW456L13_5086 +0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information