MetaCyc Pathway: aerobic respiration I (cytochrome c) in Pseudomonas simiae WCS417

Reactions and Genes	2-Furfuraldehyde 0.03 vol%
NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
PS417_16170	N.D.
PS417_16575	N.D.
PS417_16580	N.D.
PS417_16585	N.D.
PS417_16590	N.D.
PS417_16595	N.D.
PS417_16600	N.D.
PS417_16605	N.D.
PS417_16610	N.D.
PS417_16615	N.D.
PS417_16620	N.D.
PS417_16625	N.D.
PS417_16630	N.D.
PS417_16635	N.D.
PS417_03855	-1.7
Succinate dehydrogenase (ubiquinone): succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
PS417_08885	N.D.
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
PS417_13930	+0.0
PS417_20700	+0.0
PS417_20705	+0.3
PS417_20710	N.D.
PS417_20715	-0.4
PS417_20720	-0.0
PS417_20725	+0.1
PS417_20730	N.D.
PS417_20735	N.D.
PS417_00300	+0.1
PS417_00305	+0.0
PS417_00315	-0.2

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information