MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Pseudomonas simiae WCS417

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Reactions and Genes Putrescine (C)
remove
geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
PS417_08130 -0.6
PS417_08560 +0.0
PS417_09070 -0.1
PS417_09120 -0.0
PS417_11840 -0.1
PS417_12775 -0.0
PS417_12985 +0.1
PS417_13545 +0.1
PS417_14865 +0.1
PS417_15040 +0.0
PS417_15990 -0.1
PS417_18690 -0.3
PS417_19025 -0.2
PS417_19385 -0.1
PS417_19910 +0.4
PS417_21030 -1.5
PS417_21275 -0.1
PS417_23120 -0.1
PS417_23365 +0.1
PS417_27730 -0.2
PS417_28165 -0.0
PS417_04425 -0.0
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
PS417_14005 -0.2
PS417_24445 -0.0
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information