MetaCyc Pathway: urea degradation I in Pseudomonas putida KT2440
| Reactions and Genes | Propiolactam (N) |
|---|---|
| remove | |
| Urea carboxylase: CO2 + urea + ATP + H2O→urea-1-carboxylate + ADP + 2 H+ + phosphate (EC 6.3.4.6) | |
| No genes | |
| Allophanate hydrolase: urea-1-carboxylate + H2O→2 carbamate + H+ (EC 3.5.1.54) | |
| PP | -3.7 |
| PP | -1.6 |
| PP | -1.4 |
| PP | -0.4 |
| carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104) | |
| PP | -3.7 |
| PP | -1.6 |
| PP | -1.4 |
| PP | -0.4 |
Links:
- Pathway details at MetaCyc
- Fitness data for 4 genes
- All MetaCyc pathways for Pseudomonas putida KT2440
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information