MetaCyc Pathway: glycogen degradation II in Pseudomonas simiae WCS417

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Reactions and Genes Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days
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Phosphorylase:
a glycogen + n phosphate→an α-limit dextrin + n α-D-glucopyranose 1-phosphate (EC 2.4.1.1)
PS417_01675 -1.2
Amylo-alpha-1,6-glucosidase:
an α-limit dextrin→a debranched α-limit dextrin (EC 3.2.1.33)
No genes
Glucan 1,4-alpha-glucosidase:
a debranched α-limit dextrin + n H2O→n D-glucopyranose (EC 3.2.1.3)
PS417_09685 -0.1
Phosphorylase:
a debranched α-limit dextrin + n phosphate→n α-D-glucopyranose 1-phosphate (EC 2.4.1.1)
PS417_01675 -1.2
Hexokinase:
D-glucopyranose + ATP→D-glucopyranose 6-phosphate + ADP + H+ (EC 2.7.1.1; 2.7.1.2)
PS417_22685 -0.3
Phosphoglucomutase:
α-D-glucopyranose 1-phosphate→D-glucopyranose 6-phosphate (EC 5.4.2.2)
PS417_13395 -0.2
PS417_24005 N.D.
PS417_27785 +0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information