MetaCyc Pathway: pyrimidine nucleobases salvage II in Pseudomonas simiae WCS417

Add experiment(s):


Reactions and Genes Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days
remove
Cytosine deaminase:
cytosine + H+ + H2O→uracil + ammonium
(EC 3.5.4.1)
PS417_09800 -0.3
Uracil phosphoribosyltransferase (in reverse):
uracil + 5-phospho-α-D-ribose 1-diphosphate→UMP + diphosphate
(EC 2.4.2.9)
PS417_26695 -0.1
PS417_04435 -1.5

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information