| Reactions and Genes | Ying_all64 rep C; time point 3 |
|---|
| remove |
Threonine ammonia-lyase:
L-threonine→(Z)-2-aminobutenoate + H2O (EC 4.3.1.19) |
| GFF1379 | -3.4 |
| GFF1756 | -0.0 |
| GFF1962 | +1.2 |
1-aminocyclopropane-1-carboxylate deaminase:
(Z)-2-aminobutenoate→2-iminobutanoate (spontaneous) (EC 3.5.99.7; 4.3.1.19; 4.4.1.1; 4.4.1.11; 4.4.1.2) |
| GFF1379 | -3.4 |
| GFF1756 | -0.0 |
| GFF1962 | +1.2 |
| 2-iminobutanoate + H2O→2-oxobutanoate + ammonium (spontaneous) (EC 3.5.99.10; 3.5.99.7; 4.3.1.19; 4.4.1.1; 4.4.1.11; 4.4.1.2) |
| GFF1379 | -3.4 |
| GFF1756 | -0.0 |
| GFF1962 | +1.2 |
| 2-oxobutanoate→5-hydroxy-2-oxopentanoate |
| No genes |
| 5-hydroxy-2-oxopentanoate→2-oxopent-4-enoate + H2O |
| No genes |
1.-.-.-:
2-oxopent-4-enoate + an oxidized electron carrier→2-oxopenta-3,4-dienoate + a reduced two electron carrier |
| No genes |
| 2-oxopenta-3,4-dienoate→2-oxohexa-4,5-cyclopropyl-5-enoate |
| No genes |
| 2-oxohexa-4,5-cyclopropyl-5-enoate + acetyl-CoA + H2O→3-hydroxy-3-carboxy-4,5-cyclopropylhex-5-enoate + coenzyme A + H+ |
| No genes |
| 2-oxohexa-4,5-cyclopropyl-5-enoate + an aminated amino group donor→L-α-(methylenecyclopropyl)-glycine + a deaminated amino group donor |
| No genes |
| 3-hydroxy-3-carboxy-4,5-cyclopropylhex-5-enoate→2-hydroxy-3-carboxy-4,5-cyclopropylhex-5-enoate |
| No genes |
| 2-hydroxy-3-carboxy-4,5-cyclopropylhex-5-enoate + an oxidized electron carrier→2-oxo-3-carboxy-4,5-cyclopropylhex-5-enoate + a reduced two electron carrier |
| No genes |
| 2-oxo-3-carboxy-4,5-cyclopropylhex-5-enoate + H+→β-methylenecyclopropyl pyruvate + CO2 |
| No genes |
| β-methylenecyclopropyl pyruvate + L-alanine→hypoglycin A + pyruvate |
| No genes |
Gamma-glutamyltransferase:
hypoglycin A + glutathione→hypoglycin B + L-cysteinylglycine (EC 2.3.2.2) |
| GFF2135 | -0.2 |
| GFF3036 | -0.4 |
| GFF3824 | -0.4 |
| GFF5191 | -0.1 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information