MetaCyc Pathway: α-tomatine degradation in Phocaeicola dorei CL03T12C01

Reactions and Genes	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
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Beta-glucosidase: α-tomatine + H₂O→β2-tomatine + β-D-glucopyranose (EC 3.2.1.21)
ABI39_RS00690	+0.0
ABI39_RS05665	-0.1
ABI39_RS06000	-5.7
ABI39_RS07155	-0.1
α-tomatine + H₂O→tomatidine + lycotetraose
No genes
α-tomatine + H₂O→β1-tomatine + α-D-xylopyranose
No genes
β1-tomatine + H₂O→γ-tomatine + β-D-glucopyranose
No genes
γ-tomatine + H₂O→tomatidine galactoside + β-D-glucopyranose
No genes
tomatidine galactoside + H₂O→tomatidine + D-galactopyranose
No genes

Links:

Pathway details at MetaCyc
Fitness data for 4 genes
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All MetaCyc pathways for Phocaeicola dorei CL03T12C01

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information