MetaCyc Pathway: pyrimidine ribonucleosides degradation in Escherichia coli BW25113
| Reactions and Genes | 1-ethyl-3-methylimidazolium acetate 30 mM |
|---|---|
| remove | |
| Cytidine deaminase: cytidine + H+ + H2O→uridine + ammonium (EC 3.5.4.5) | |
| b2143 (cdd) | -3.1 |
| Pyrimidine-nucleoside phosphorylase: uridine + phosphate→uracil + α-D-ribose-1-phosphate (EC 2.4.2.2; 2.4.2.3) | |
| b0391 (yaiE) | +0.1 |
| b3831 (udp) | -0.1 |
| b4382 (deoA) | +0.0 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information