MetaCyc Pathway: fatty acid β-oxidation II (plant peroxisome) in Pseudomonas fluorescens GW456-L13

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Reactions and Genes L-Valine (C)
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a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate
No genes
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide
(EC 1.3.3.6)
No genes
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
PfGW456L13_1812 -0.3
PfGW456L13_2246 -0.6
PfGW456L13_2412 -0.1
PfGW456L13_2433 +0.0
PfGW456L13_2434 +0.2
PfGW456L13_2533 +0.2
PfGW456L13_2535 +0.1
PfGW456L13_2984 -5.2
PfGW456L13_2986 -5.4
PfGW456L13_3210 +0.0
PfGW456L13_3244 +0.0
PfGW456L13_3388 +0.0
PfGW456L13_3427 -0.8
PfGW456L13_3636 +0.0
PfGW456L13_4041 -3.1
PfGW456L13_412 -0.1
PfGW456L13_4142 N.D.
PfGW456L13_4146 +0.2
PfGW456L13_4531 -0.4
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+
(EC 1.1.1.35)
PfGW456L13_1094 +0.1
PfGW456L13_3395 -0.4
PfGW456L13_4041 -3.1
PfGW456L13_412 -0.1
PfGW456L13_4146 +0.2
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA
(EC 2.3.1.16)
PfGW456L13_2157 +0.0
PfGW456L13_2411 -0.2
PfGW456L13_2430 +0.1
PfGW456L13_2498 -0.0
PfGW456L13_2538 -0.2
PfGW456L13_2539 -0.1
PfGW456L13_29 +0.2
PfGW456L13_2982 -1.1
PfGW456L13_3394 +0.0
PfGW456L13_3408 +0.0
PfGW456L13_4040 -0.8
PfGW456L13_4147 +0.4
PfGW456L13_4590 +0.3

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information