MetaCyc Pathway: superpathway of ammonia assimilation (plants) in Agrobacterium fabrum C58

Add experiment(s):


Reactions and Genes D-Saccharic potassium salt (C)
remove
Glutamate--ammonia ligase:
ammonium + L-glutamate + ATP→L-glutamine + ADP + H+ + phosphate (EC 6.3.1.2)
Atu0193 -0.0
Atu0602 +0.3
Atu1770 -1.6
Atu2142 +0.1
Atu2416 +0.2
Atu4230 -0.2
Glutamate synthase (ferredoxin) (in reverse):
L-glutamine + 2-oxoglutarate + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→2 L-glutamate + 2 an oxidized ferredoxin [iron-sulfur] cluster (EC 1.4.7.1)
No genes
Glutamate synthase (NADH) (in reverse):
L-glutamine + 2-oxoglutarate + NADH + H+→2 L-glutamate + NAD+ (EC 1.4.1.14)
Atu0145 -0.1
Atu3783 -1.2

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information