MetaCyc Pathway: tetradecanoate biosynthesis (mitochondria) in Agrobacterium fabrum C58

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Reactions and Genes L-Xylose (C)
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3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
an acetoacetyl-[acp] + NADPH + H+→a (3R)-3-hydroxybutanoyl-[acp] + NADP+ (EC 1.1.1.100)
Atu0705 +0.3
Atu0990 -0.0
Atu1095 N.D.
Atu1255 -0.2
Atu1338 -0.1
Atu2042 -0.3
Atu3051 -0.1
Atu3074 +0.0
Atu3333 +0.1
Atu3531 +0.0
Atu3813 -1.2
Atu4220 -0.0
Atu4325 -0.1
Atu4595 -0.1
Atu4821 -0.0
Atu4877 +0.1
Atu5122 -0.1
Atu5214 N.D.
Atu5250 N.D.
Atu5438 -0.2
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxybutanoyl-[acp]→a (2E)-but-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Atu0151 N.D.
Atu1383 N.D.
Atu1599 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) (in reverse):
a (2E)-but-2-enoyl-[acp] + NADPH + H+→a butanoyl-[acp] + NADP+ (EC 1.3.1.10; 1.3.1.104; 1.3.1.39)
Atu5181 -0.2
Atu5185 -0.0
Atu5391 N.D.
Beta-ketoacyl-acyl-carrier-protein synthase I:
a butanoyl-[acp] + malonyl-CoA + H+→a 3-oxohexanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.41)
Atu0150 N.D.
Atu1097 N.D.
Atu4216 +0.1
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxohexanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyhexanoyl-[acp] + NADP+ (EC 1.1.1.100)
Atu0705 +0.3
Atu0990 -0.0
Atu1095 N.D.
Atu1255 -0.2
Atu1338 -0.1
Atu2042 -0.3
Atu3051 -0.1
Atu3074 +0.0
Atu3333 +0.1
Atu3531 +0.0
Atu3813 -1.2
Atu4220 -0.0
Atu4325 -0.1
Atu4595 -0.1
Atu4821 -0.0
Atu4877 +0.1
Atu5122 -0.1
Atu5214 N.D.
Atu5250 N.D.
Atu5438 -0.2
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyhexanoyl-[acp]→a (2E)-hex-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Atu0151 N.D.
Atu1383 N.D.
Atu1599 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) (in reverse):
a (2E)-hex-2-enoyl-[acp] + NADPH + H+→a hexanoyl-[acp] + NADP+ (EC 1.3.1.10; 1.3.1.104; 1.3.1.39)
Atu5181 -0.2
Atu5185 -0.0
Atu5391 N.D.
Beta-ketoacyl-acyl-carrier-protein synthase I:
a hexanoyl-[acp] + malonyl-CoA + H+→a 3-oxooctanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.41)
Atu0150 N.D.
Atu1097 N.D.
Atu4216 +0.1
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxooctanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyoctanoyl-[acp] + NADP+ (EC 1.1.1.100)
Atu0705 +0.3
Atu0990 -0.0
Atu1095 N.D.
Atu1255 -0.2
Atu1338 -0.1
Atu2042 -0.3
Atu3051 -0.1
Atu3074 +0.0
Atu3333 +0.1
Atu3531 +0.0
Atu3813 -1.2
Atu4220 -0.0
Atu4325 -0.1
Atu4595 -0.1
Atu4821 -0.0
Atu4877 +0.1
Atu5122 -0.1
Atu5214 N.D.
Atu5250 N.D.
Atu5438 -0.2
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyoctanoyl-[acp]→a (2E)-oct-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Atu0151 N.D.
Atu1383 N.D.
Atu1599 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) (in reverse):
a (2E)-oct-2-enoyl-[acp] + NADPH + H+→an octanoyl-[acp] + NADP+ (EC 1.3.1.10; 1.3.1.104; 1.3.1.39)
Atu5181 -0.2
Atu5185 -0.0
Atu5391 N.D.
Beta-ketoacyl-acyl-carrier-protein synthase I:
an octanoyl-[acp] + malonyl-CoA + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.41)
Atu0150 N.D.
Atu1097 N.D.
Atu4216 +0.1
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxodecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxydecanoyl-[acp] + NADP+ (EC 1.1.1.100)
Atu0705 +0.3
Atu0990 -0.0
Atu1095 N.D.
Atu1255 -0.2
Atu1338 -0.1
Atu2042 -0.3
Atu3051 -0.1
Atu3074 +0.0
Atu3333 +0.1
Atu3531 +0.0
Atu3813 -1.2
Atu4220 -0.0
Atu4325 -0.1
Atu4595 -0.1
Atu4821 -0.0
Atu4877 +0.1
Atu5122 -0.1
Atu5214 N.D.
Atu5250 N.D.
Atu5438 -0.2
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydecanoyl-[acp]→a (2E)-dec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Atu0151 N.D.
Atu1383 N.D.
Atu1599 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) (in reverse):
a (2E)-dec-2-enoyl-[acp] + NADPH + H+→a decanoyl-[acp] + NADP+ (EC 1.3.1.10; 1.3.1.104; 1.3.1.39)
Atu5181 -0.2
Atu5185 -0.0
Atu5391 N.D.
Beta-ketoacyl-acyl-carrier-protein synthase I:
a decanoyl-[acp] + malonyl-CoA + H+→a 3-oxododecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.41)
Atu0150 N.D.
Atu1097 N.D.
Atu4216 +0.1
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxododecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxydodecanoyl-[acp] + NADP+ (EC 1.1.1.100)
Atu0705 +0.3
Atu0990 -0.0
Atu1095 N.D.
Atu1255 -0.2
Atu1338 -0.1
Atu2042 -0.3
Atu3051 -0.1
Atu3074 +0.0
Atu3333 +0.1
Atu3531 +0.0
Atu3813 -1.2
Atu4220 -0.0
Atu4325 -0.1
Atu4595 -0.1
Atu4821 -0.0
Atu4877 +0.1
Atu5122 -0.1
Atu5214 N.D.
Atu5250 N.D.
Atu5438 -0.2
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydodecanoyl-[acp]→a (2E)-dodec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Atu0151 N.D.
Atu1383 N.D.
Atu1599 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) (in reverse):
a (2E)-dodec-2-enoyl-[acp] + NADPH + H+→a dodecanoyl-[acp] + NADP+ (EC 1.3.1.10; 1.3.1.104; 1.3.1.39)
Atu5181 -0.2
Atu5185 -0.0
Atu5391 N.D.
Dodecanoyl-[acyl-carrier-protein] hydrolase:
a dodecanoyl-[acp][nil] + H2O[nil]→laurate[nil] + a soluble [acyl-carrier protein][nil] + H+[nil] (EC 3.1.2.21)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase I:
a dodecanoyl-[acp] + malonyl-CoA + H+→a 3-oxotetradecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.41)
Atu0150 N.D.
Atu1097 N.D.
Atu4216 +0.1
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxotetradecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxytetradecanoyl-[acp] + NADP+ (EC 1.1.1.100)
Atu0705 +0.3
Atu0990 -0.0
Atu1095 N.D.
Atu1255 -0.2
Atu1338 -0.1
Atu2042 -0.3
Atu3051 -0.1
Atu3074 +0.0
Atu3333 +0.1
Atu3531 +0.0
Atu3813 -1.2
Atu4220 -0.0
Atu4325 -0.1
Atu4595 -0.1
Atu4821 -0.0
Atu4877 +0.1
Atu5122 -0.1
Atu5214 N.D.
Atu5250 N.D.
Atu5438 -0.2
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxytetradecanoyl-[acp]→a (2E)-tetradec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Atu0151 N.D.
Atu1383 N.D.
Atu1599 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) (in reverse):
a (2E)-tetradec-2-enoyl-[acp] + NADPH + H+→a myristoyl-[acp] + NADP+ (EC 1.3.1.10; 1.3.1.104; 1.3.1.39)
Atu5181 -0.2
Atu5185 -0.0
Atu5391 N.D.
Oleoyl-[acyl-carrier-protein] hydrolase:
a myristoyl-[acp] + H2O→tetradecanoate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information