MetaCyc Pathway: L-arabinose degradation V in Agrobacterium fabrum C58
| Reactions and Genes | L-Xylose (C) |
|---|---|
| remove | |
| L-arabinofuranose→L-arabinopyranose (spontaneous) | |
| No genes | |
| α-L-arabinopyranose + NAD(P)+→L-arabinono-1,4-lactone + NAD(P)H + H+ (EC 1.1.1.376) | |
| No genes | |
| L-arabinonolactonase: L-arabinono-1,4-lactone + H2O→L-arabinonate + H+ (EC 3.1.1.15) | |
| No genes | |
| L-arabinonate dehydratase: L-arabinonate→2-dehydro-3-deoxy-L-pentonate + H2O (EC 4.2.1.25) | |
| No genes | |
| 2-dehydro-3-deoxy-L-pentonate + NAD+→5-hydroxy-2,4-dioxopentanoate + NADH + H+ (EC 1.1.1.401) | |
| No genes | |
| 5-hydroxy-2,4-dioxopentanoate + H2O→glycolate + pyruvate + H+ (EC 3.7.1.26) | |
| Atu0014 | -3.6 |
| Atu4593 | -0.0 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information