MetaCyc Pathway: superpathway of L-phenylalanine biosynthesis in Agrobacterium fabrum C58

Reactions and Genes	D-Quinic (C)
3-deoxy-7-phosphoheptulonate synthase: D-erythrose 4-phosphate + phosphoenolpyruvate + H2O→3-deoxy-D-arabino-heptulosonate 7-phosphate + phosphate (EC 2.5.1.54)
Atu1610	N.D.
3-dehydroquinate synthase: 3-deoxy-D-arabino-heptulosonate 7-phosphate→3-dehydroquinate + phosphate (EC 4.2.3.4)
Atu3625	N.D.
3-dehydroquinate dehydratase: 3-dehydroquinate→3-dehydroshikimate + H2O (EC 4.2.1.10)
Atu1332	N.D.
Atu1426	N.D.
Atu4531	-6.8
Shikimate dehydrogenase (in reverse): 3-dehydroshikimate + NADPH + H+→shikimate + NADP+ (EC 1.1.1.25)
Atu0003	N.D.
Atu4295	-0.2
Atu4532	-6.4
Shikimate kinase: shikimate + ATP→shikimate 3-phosphate + ADP + H+ (EC 2.7.1.71)
Atu3626	N.D.
3-phosphoshikimate 1-carboxyvinyltransferase: shikimate 3-phosphate + phosphoenolpyruvate→5-enolpyruvoyl-shikimate 3-phosphate + phosphate (EC 2.5.1.19)
Atu0642	N.D.
Chorismate synthase: 5-enolpyruvoyl-shikimate 3-phosphate→chorismate + phosphate (EC 4.2.3.5)
Atu0754	N.D.
Chorismate mutase: chorismate→prephenate (EC 5.4.99.5)
Atu2698	N.D.
Prephenate dehydratase: prephenate + H+→3-phenyl-2-oxopropanoate + CO2 + H2O (EC 4.2.1.51)
Atu0099	-7.5
Aspartate transaminase (in reverse): 3-phenyl-2-oxopropanoate + L-glutamate→L-phenylalanine + 2-oxoglutarate (EC 2.6.1.1; 2.6.1.27; 2.6.1.57)
Atu0235	+0.0
Atu0529	-0.1
Atu1011	+0.1
Atu1589	-4.1
Atu1848	-0.1
Atu2015	-4.2
Atu2196	N.D.
Atu3612	N.D.
Atu4266	-0.2
Atu4278	-0.1

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information