MetaCyc Pathway: chorismate biosynthesis II (archaea) in Agrobacterium fabrum C58

Add experiment(s):


Reactions and Genes D-Quinic (C)
remove
Aspartate kinase:
L-aspartate + ATP→L-aspartyl-4-phosphate + ADP (EC 2.7.2.4)
Atu4172 N.D.
D-glyceraldehyde 3-phosphate→enolaldehyde + phosphate
No genes
Aspartate-semialdehyde dehydrogenase (in reverse):
L-aspartyl-4-phosphate + NADPH + H+→L-aspartate 4-semialdehyde + NADP+ + phosphate (EC 1.2.1.11)
Atu2490 N.D.
enolaldehyde→methylglyoxal (spontaneous)
No genes
methylglyoxal + β-D-fructofuranose 1,6-bisphosphate→D-glyceraldehyde 3-phosphate + 6-deoxy-5-ketofructose 1-phosphate (EC 2.2.1.11)
No genes
6-deoxy-5-ketofructose 1-phosphate + L-aspartate 4-semialdehyde→2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate + hydroxypyruvaldehyde phosphate (EC 2.2.1.10)
No genes
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate + NAD+ + H2O→3-dehydroquinate + ammonium + NADH + H+ (EC 1.4.1.24)
No genes
3-dehydroquinate dehydratase:
3-dehydroquinate→3-dehydroshikimate + H2O (EC 4.2.1.10)
Atu1332 N.D.
Atu1426 N.D.
Atu4531 -6.8
Shikimate dehydrogenase (in reverse):
3-dehydroshikimate + NADPH + H+→shikimate + NADP+ (EC 1.1.1.25)
Atu0003 N.D.
Atu4295 -0.2
Atu4532 -6.4
Shikimate kinase:
shikimate + ATP→shikimate 3-phosphate + ADP + H+ (EC 2.7.1.71)
Atu3626 N.D.
3-phosphoshikimate 1-carboxyvinyltransferase:
shikimate 3-phosphate + phosphoenolpyruvate→5-enolpyruvoyl-shikimate 3-phosphate + phosphate (EC 2.5.1.19)
Atu0642 N.D.
Chorismate synthase:
5-enolpyruvoyl-shikimate 3-phosphate→chorismate + phosphate (EC 4.2.3.5)
Atu0754 N.D.

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information