MetaCyc Pathway: superpathway of L-serine and glycine biosynthesis I in Agrobacterium fabrum C58

Add experiment(s):


Reactions and Genes L-ascorbate (C)
remove
Phosphoglycerate dehydrogenase:
3-phospho-D-glycerate + NAD+→3-phosphooxypyruvate + NADH + H+ (EC 1.1.1.95)
Atu1400 -0.1
Atu3027 +0.3
Atu3109 +0.1
Atu3399 -0.2
Atu3706 -2.5
Atu4048 +0.0
Atu4507 -0.3
Atu4691 -5.9
Atu5222 N.D.
Atu5328 N.D.
Atu5399 N.D.
Atu5474 +0.1
Phosphoserine transaminase (in reverse):
3-phosphooxypyruvate + L-glutamate→O-phospho-L-serine + 2-oxoglutarate (EC 2.6.1.52)
Atu3707 -4.5
Phosphoserine phosphatase:
O-phospho-L-serine + H2O→L-serine + phosphate (EC 3.1.3.3)
Atu2040 -1.1
Glycine hydroxymethyltransferase:
L-serine + a tetrahydrofolate→glycine + a 5,10-methylenetetrahydrofolate + H2O (EC 2.1.2.1)
Atu1165 N.D.
Atu4314 +0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information