MetaCyc Pathway: fatty acid β-oxidation IV (unsaturated, even number) in Pseudomonas simiae WCS417

Add experiment(s):


Reactions and Genes LB_noSalt with Chloride 1100 mM
remove
3-hydroxybutyryl-CoA epimerase:
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 5.1.2.3)
PS417_07575 -0.6
PS417_21215 -0.0
a (2E,4Z)-2,4-dienoyl-CoA + NADPH + H+→a (3E)-3-enoyl-CoA + NADP+ (EC 1.3.1.124)
No genes
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a (2E)-2-enoyl-CoA + H2O (EC 4.2.1.119)
PS417_22080 N.D.
Dodecenoyl-CoA isomerase:
a (3E)-3-enoyl-CoA→a (2E)-2-enoyl-CoA
(EC 5.3.3.8)
PS417_07575 -0.6
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
PS417_07030 +0.2
PS417_07575 -0.6
PS417_08535 -0.4
PS417_10680 -0.3
PS417_11445 -2.2
PS417_12870 -0.2
PS417_13835 -0.2
PS417_13845 N.D.
PS417_21195 +0.0
PS417_21215 -0.0
PS417_22625 -0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information